Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015809562.1_cds_XP_016495801.1_10083
CDS Infomation

[gene=LOC107814840] [db_xref=GeneID:107814840] [protein=aspartyl protease family protein At5g10770-like] [protein_id=XP_016495801.1] [location=complement(join(64597..65861,66366..66528))] [gbkey=CDS]
Sequence

ATGTCTCTTTGGCCATATTCAACTTTTCTTCTTCTTTTTCTGATGCTCGCTTCCAGTAAT
GGCGCATTTGGCAATAACGCAGCAAATAAGCTAATTCTTCAACTCAAAACACTTCAAAGG
ACACAGCAGAGCAACAACCAAAGTTGTTATTCCCAAAAATCAAGAAGTGAAAATGGAGCA
ATAGTATTAGAAATGAAGCACAAAGATTACTGTTTTGGATCAACTGGCGACATGAACAGA
AAGCTACAGAAACAACTAGTAGTTGATTATATTCGAGTTCGGTCAATACAAGCCAATATC
AGAAGAATCATTTTTGGAAAAGTTGAAGCTTTATCACAAACCAAAATTCCTATAACTTCT
GGTGTCAAATTGCATACCCTAAATTACATTGTCACAGTAACGTTAGGTGGTCGAAATGTG
ACAGTAATTGTGGACACAGGAAGTGATCTAACATGGGTTCAGTGCCAACCTTGTAGATTG
TGTTACAATCAACCAGAACCTCTGTTCAACCCTTCTGTTTCTACTAATTATCAATCAGTT
GCATGCAACTCAGCGGCGTGTCAATCTCTTCAATCTGCAACTGGAAATTCAGGATTATGT
GGGAATGATTTAACAAAATGTAATTATGTTGTCAGTTATGGAGATGGATCCTACACTAAA
GGTGAACTTGGTCAAGATCATTTGGTTCTTGGAAGCACTTCTGTTAACAATTTTGTCTTT
GGGTGTGGCAGGAATAATAAAGGTCTGTTTGGTTTAGCTTCAGGACTTATGGGACTTGGA
AAGAGTAATCTTTCTTTGATTTCTCAAACTACTGGGATTTTTGGTGGTGTTTTCTCCTAT
TGTTTGCCTTCAGTTGAAGCTAAATCCTCTGGCTCATTAGTATTTGGTGGTGACACTTCA
GTTTTAAAGAATTCTACACCCATTTCTTACACTAGAATGGTTGCTAATCCACAGCTTTTT
AGCTTCTATTTTCTTAATTTAACCGGGGCTAGTATCGGTGGGGTCACTATTCAAGATTCA
GCTTTTGGAAAATCTGGAATTATCATTGATTCTGGCACAGTTATCACAAGGCTTCCTCCC
ACTATTTACAAAGCTGTAAAAGCTGAGTTCTTGAAACAATTCTCAGGGTACCGTTTAGCA
CAAGGATTTTCGATTCTTGATACTTGTTTTAATCTCTCTGCATATGAAGAAGTGAGCATT
CCTACTATTAAAATGCAATTTGAGGGTGGTGTTGAGATGGAAGTGGATGTTACTGGGGTT
CTTTATTTTGTAAAGAGTGATGCATCACAGGTATGTTTGGCTTTGGCAAGCCTCCAATAT
GAAGATGAGATAGGAATTATTGGAAATTATCAGCAGAAGAATACTAGGGTCATATACGAC
ATAAAGCAGTCACGAGTTGGATTTGCAAAAGAAACATGCAACTTCTGA

Peptide Sequence

PEP ID

XP_016495801.1
PEP Infomation

PREDICTED: aspartyl protease family protein At5g10770-like [Nicotiana tabacum]
Sequence

MSLWPYSTFLLLFLMLASSNGAFGNNAANKLILQLKTLQRTQQSNNQSCYSQKSRSENGA
IVLEMKHKDYCFGSTGDMNRKLQKQLVVDYIRVRSIQANIRRIIFGKVEALSQTKIPITS
GVKLHTLNYIVTVTLGGRNVTVIVDTGSDLTWVQCQPCRLCYNQPEPLFNPSVSTNYQSV
ACNSAACQSLQSATGNSGLCGNDLTKCNYVVSYGDGSYTKGELGQDHLVLGSTSVNNFVF
GCGRNNKGLFGLASGLMGLGKSNLSLISQTTGIFGGVFSYCLPSVEAKSSGSLVFGGDTS
VLKNSTPISYTRMVANPQLFSFYFLNLTGASIGGVTIQDSAFGKSGIIIDSGTVITRLPP
TIYKAVKAEFLKQFSGYRLAQGFSILDTCFNLSAYEEVSIPTIKMQFEGGVEMEVDVTGV
LYFVKSDASQVCLALASLQYEDEIGIIGNYQQKNTRVIYDIKQSRVGFAKETCNF

Transcript Sequence

Gene sequence data has not been registered.